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GenePattern

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GenePattern 3.9.3 now available!
 
@GenePattern 3.9.3 released! Download multiple jobs all at once, hide left hand panel, and more! http://t.co/qdC6dy23XM #bioinformatics
Released TBA. GenePattern 3.9.3 requires Java 7. Click on the links below for details on the updates. New User Features; Bug Fixes and Enhancements; Server administrators and developers see Admin Support. System requirements and known issues are detailed on the following pages.
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GenePattern

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GenePattern & GenomeSpace office hours today!
 
The GenePattern & GenomeSpace teams will be on hand in Fuji (415 main rm 4001) or via Hangout to answer your questions. Today, Wednesday, May 6th @ Noon
GenePattern & GenomeSpace Office Hours
Wed, May 6, 12:00 PM EDT
Hangouts

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GenePattern

Discussion  - 
 
GenePattern 3.9.2 released!
 
GP 3.9.2 released: Search jobs by tags & comments, faster large file upload, new Mac installer & more http://ow.ly/KBiYO #bioinformatics
Run. Public Server · Download. Learn. User Guide · 10-Minute Tutorial · Differential Expression Tutorial · File Formats Guide · Administrators Guide · Programmers Guide · Concepts · Video Tutorials · Previous Versions · Modules; Analysis. RNA-seq-Based Gene Expression · Array-Based Gene ...
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GenePattern

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Office Hours today @ Noon!
 
Join us in Fuji (415 Main rm 4001) or via Hangouts @ Noon  - bring your GenePattern or GenomeSpace questions and find yourself a spot in the sun.
GenePattern and GenomeSpace Office Hours
Wed, March 11, 12:00 PM EDT
Hangouts

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GenePattern

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Support for #Affymetrix ST chips, now in GP!
 
Now in GP: Support for @Affymetrix gene & exon ST arrays through AffySTExpressionFileCreator module http://ow.ly/Jp5S9 #bioinformatics
AffySTExpressionFileCreator Documentation, v0.x Print-icon ▸ Open Module on GenePattern Public Server. This module is currently in beta release (targeted for release as v1). The documentation may be incomplete. Description: Creates a RES or GCT file from a set of CEL files from Affymetrix ST ...
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GenePattern

Discussion  - 
 
GenePattern & Genomspace office hours today!
 
We're back in the office! Come by and visit us today in Katahdin (415 Main Rm 2001) or hop on the Hangout.
GenePattern & GenomeSpace Office Hours
Wed, February 11, 12:00 PM EST
Hangouts

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GenePattern

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GenePattern & GenomeSpace office hours today at noon!
 
Stop by Fuji, or join us via Hangouts, today at noon for GenePattern & GenomeSpace Office Hours
GenePattern & GenomeSpace Office Hours
Wed, January 14, 12:00 PM EST
Hangouts

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GenePattern

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Updated PARIS now available: updated underlying metric, & allowed for NA/NaNs in the target profile file. http://ow.ly/FCwf7 #RNAi
Dec 2, 5:50 pm --- The maintenance update is complete and the system is back to normal. --- Nov 19 --- Acgh2Tab Convert acgh files to a tab-delimited format usable by Genomica, published in GPARC, now available for use on this server. --- Sept 22 --- Changes to GenePattern Data Storage Policy ...
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GenePattern

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GP Production upcoming downtime
 
The public server will be offline for a maintenance update this Wed, Nov 26, from 8am - 9am. More details here: ow.ly/EO3rQ
The server will be offline for a maintenance update on Wednesday, November 26 from 8:00 am to 9:00 am. We suggest waiting until after 9:00 before starting any new long running jobs or pipelines. Please correct the following errors before proceeding: Sign in to GenePattern, Click to Register ...
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GenePattern

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Office Hours - today @ noon!
 
Stop on by Fuji (415 Main 4001) or join us via HangOut - we look forward to helping you out!
GenePattern & GenomeSpace Office Hours
Wed, November 19, 2014, 12:00 PM EST
Hangouts

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GenePattern

Discussion  - 
 
Office Hours today!
 
Stop by Fuji (415 Main Rm 4001) with any of your GenePattern or GenomeSpace questions, or join us via Hangout. Team members will be on-hand to help out. See you there!
GenePattern & GenomeSpace Office Hours
Wed, June 17, 12:00 PM EDT
Hangouts

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GenePattern

Discussion  - 
 
GenePattern & GenomeSpace Office Hours today @ Noon
 
GenePattern and GenomeSpace team members will be on hand in Fuji (415 main rm 4001) or via Hangout to answer your questions. Today, Wednesday, April 22nd @ Noon
GenePattern & GenomeSpace Office Hours
Wed, April 22, 12:00 PM EDT
Hangouts

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GenePattern

Discussion  - 
 
Upcoming GenePattern server downtime
 
GenePattern broadinstitute.org servers unavailable for maintenance Tuesday, 3/24/15 from 6am - noon. More info at http://ow.ly/KpvUj
Posted on Friday, March 13, 2015 at 04:58PM by Barbara Hill Meyers. GenePattern servers at the Broad Institute will be offline for scheduled IT maintenance on. Tuesday, March 24, 2015; from 6 a.m. to noon. During this time the following servers will be unavailable: ...
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GenePattern

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GenePattern & GenomeSpace Office Hours today @ Noon in Yosemite & on Hangouts
 
Come on by Yosemite (75Ames 4001) or join us via Hangouts - trouble with Java? building a module? getting started in GenomeSpace?  Stop in and we'll help out!
GenePattern & GenomeSpace Office Hours
Wed, February 25, 12:00 PM EST
Hangouts

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GenePattern

Discussion  - 
 
FCSNormalization v2 available (via @GPArchive& BC Cancer Research Centre): updated to use less memory http://ow.ly/ITQtI #flowcytometry
Jan 20 -- IGV updated: addresses previous issues with launching IGV from GenePattern -- 9:10am Jan 20 -- The software update to 3.9.1 is complete. The "what's new in GenePattern" link from the home page will fill you in on the details. Please contact us at gp-help with your questions and ...
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GenePattern

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GenePattern 3.9.1 is now available!
 
GenePattern 3.9.1 released! Comments & tags for jobs, support for JavaScript visualizers & more http://ow.ly/HIX6q #bioinformatics
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GenePattern

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IGV module updated to address issues with launching from GenePattern.
 
Updated IGV module now available: addresses previous issues with launching IGV from GenePattern http://ow.ly/HEyYL #bioinformatics
IGV Documentation, v5 Print-icon ▸ Open Module on GenePattern Public Server. Description: Sends data in GenePattern to a running Integrative Genomics Viewer (IGV) application. Author: Jim Robinson, Marc-Danie Nazaire, Barbara Hill, Peter Carr (Broad Institute). Contact: ...
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GenePattern

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GenePattern team coverage over the holidays
 
The GenePattern team will be on vacation Dec 24 - Jan 5. All servers and repositories will remain up. For details: http://www.broadinstitute.org/cancer/software/genepattern/blog/2014/12/22/genepattern-server-coverage-support-dec-24-jan-5
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GenePattern

Discussion  - 
 
Office Hours today!
 
Drop by Fuji in 4001 415 Main st, or hop on a Hangout to get your GenePattern and GenomeSpace questions answered. 

We'll see you there!
GenePattern and GenomeSpace Office Hours
Wed, December 3, 2014, 12:00 PM EST
Hangouts

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GenePattern

Discussion  - 
 
GPBroad is back up
 
For our Broadie users: The Internal GenePattern Server, gpbroad, is back up and running normally.
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