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David Powell
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Interactive RNA-Seq analysis using Degust (part 1)
Introduction Degust  is a freely available, web-based tool for analysis of differential gene expression data.  It was primarily designed for RNA-Seq data, but it can also be used with microarray experiments.   Exploring your own data is easy using the publi...
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Visualizing Cuffdiff output using Vennt
I recently added a new option to Vennt  which makes it easy to directly visualize the output from your Tophat/Cufflinks/Cuffdiff analysis.  This is particularly useful when comparing multiple conditions in a single Cuffdiff run.  Vennt will produce an html ...
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Whiskey and data analysis, a perfect combination
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Vennt : Venn diagrams for list of Differential Expressed Genes
Recently, I have analysed a number of RNA-seq experiments.  Often these experiments have multiple conditions so it is possible to perform several different pair-wise comparisons.  After doing a number of these pair-wise comparisons, my collaborators invaria...
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