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Jean-Patrick Pommier
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learn how to use TensorFlow effectively. TensorFlow offers high level interfaces like Keras and Estimators, which can be used without being an expert. 

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nice
A small gif to show the work done for these models.
#cnc #wood #milled #blender #b3d

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Resolution of pairs of overlapping chromosomes by semantic segmentation, results from the cooperation.
Recently, Rohit Gosh and  Lily Hu   posted reports that a neural network called U-Net can be trained to resolve pairs of overlapping chromosomes. The story of the dataset: A first version of the dataset was proposed on kaggle: https://www.kaggle.com/jeanpat...

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Modelisation of overlapping pairs of chromosomes: a dataset containing more than 200 000 pairs of images in png format.
Two datasets modelizing pair of overlapping chromosomes are available on github: original github repo forked repository Images are available at full resolution but also at a lower resolution to reduce the memory imprint. To get a smaller memory imprint, the...

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100 overlapping chromosomes isolated from 14 metaphases of human lymphocytes
Metaphasics chromosomes were hybrized with a PNA telomeric probe (CCCTAA-Cy3) and an additional oligo DNA probe (Cy5) for testing purposes. 100 overlapping chromosomes can be found in that dataset (jpp21). The dataset consists of 12 bits raw greyscaled imag...

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Ready for semantic segmentation and looking for a problem?

https://github.com/chromosome-seg/DeepFISH
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04/03/2017
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