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Daniel Baker
Attended University of Illinois at Urbana-Champaign
Lives in Salt Lake City
253 followers|34,104 views
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Daniel Baker

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Interesting follow-up to the old phenolog paper published on bioRxiv last night:

http://www.biorxiv.org/content/biorxiv/early/2015/04/13/017947.full.pdf

At once counterintuitive as a model and obvious as a way to interrogate mammalian pathology in model organisms.
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In this post I will use Python to explore more measures of fit for linear regression. I will consider the coefficient of determination (R2), hypothesis tests (F, t, Omnibus), AIC, BIC, and other measures. This will be an expansion of a previous post where I discussed how to assess linear models in R, via the IPython notebook, by looking at the residual, and several measures involving the leverage.
Introduction In this post I will use Python to explore more measures of fit for linear regression. I will consider the coefficient of determination (R2), hypothesis tests ($latex F$, $latex t$, Omn...
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Excellent 'field guide' for more recent advances in statistical mechanics than our friends Ludwig and Max.

http://www.romanfrigg.org/writings/SM_Fieldguide.pdf
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I'm just trusting that it makes sense in some way. "Don't Be Evil" can't just be an empty promise after all these years and such enormous contributions.
Dear Google users— You may be aware of press reports alleging that Internet companies have joined a secret U.S. government program called PRISM to give the National Security Agency direct access to our servers. As Google’s CE...
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Thanks Daniel for posting this... I've been very concerned about the current administration and the Gandianton look of things
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Natural Language Processing and Big Data with Python NLTK and Hadoop – Part 1-6:
http://j.mp/160JANy
http://j.mp/12o1Qde
http://j.mp/160JANC
http://j.mp/12o1Qdg
http://j.mp/12o1SBW
http://j.mp/160JANw
Benjamin Bengfort is a full stack data scientist with a passion for massive machine learning involving gigantic training data sets. A founding partner and CTO at Unbound Concepts, he lead the development of Meridian, the company's textual complexity ranking algorithm designed to parse and ...
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Daniel Baker

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Handy Dandy Notebook!
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...dary!  Or, as you'll see below, when did it become slightly less legendary?  The analysis in this post was inspired by DiffusePrioR's analysis of when The Simpsons became less Cromulent. When I ...
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Part 2 of my PqQt4 and Python 3 Tutorial Series is up...

This video covers connecting to buttons/labels in the gui, and using signal/emit (the new pythonic version of signal/emit, many tuts use the older version)
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When Passive-Agressive Behavior isn't enough to satisfy your needs for inner angst, systematize! http://jmlr.csail.mit.edu/papers/v7/crammer06a.html
Online Passive-Aggressive Algorithms. Koby Crammer, Ofer Dekel, Joseph Keshet, Shai Shalev-Shwartz, Yoram Singer; 7(Mar):551--585, 2006. Abstract. We present a family of margin based online learning a...
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Nice change of pace with the mascot animal. Is that cthulu?
 
Get a free download of the early release of Graph Databases book. 
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Have him in circles
253 people
Shoaib Baloch Raees's profile photo
Zeeshan Sattar's profile photo
Probabilistic Graphical Models's profile photo
Andrew Magis's profile photo
Areejit Samal's profile photo
Ninta Belle's profile photo
Charlie Twiss's profile photo
Benjamin Brilliant's profile photo
Jeff Orr's profile photo
Education
  • University of Illinois at Urbana-Champaign
    Biophysics & Computational Biology, 2008 - 2013
  • Ball State University
    Physics and Biology, 2003 - 2008
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Computational biologist, biophysicist, pianist
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Salt Lake City
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Seattle, Washington - Urbana, IL - Shanghai, China - Worcester, Massachusetts - Columbus, Ohio - Muncie, Indiana - Huntington Beach, CA - Santa Monica, CA - Paris, France - Wickenburg, AZ - Hiroshima, Japan - Salt Lake City
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